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cTAKES

Apache cTAKES: clinical Text Analysis and Knowledge Extraction System is an open-source natural language processing system for information extraction… 
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Apache OpenNLPApache UIMAJavaNatural language processing

Papers overview

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2018
2018
SINAI at CLEF eHealth 2018 Task 3. Using cTAKES to Remove Noise from Expanding Queries with Google
In this paper we present our participation as SINAI research group from the Universidad de Jaén at Task 3 “Consumer Health Search… 
2017
2017
Mapping client messages to a unified data model with mixture feature embedding convolutional neural network
Data mapping among different data standards in health institutes is often a necessity when data exchanges occur among different… 
2017
2017
Evaluating and Improving Annotation Tools for Medical Forms
The annotation of entities with concepts from standardized terminologies and ontologies is of high importance in the life… 
2016
2016
Semantic Knowledge Base Construction from Radiology Reports
The tremendous quantity of data stored daily in healthcare institutions demands the development of new methods to summarize and… 
2016
2016
A Light-weight & Robust System for Clinical Concept Disambiguation
This paper presents a system for the normalization of concept mentions in clinical narratives. We evaluate and compare it against… 
2014
2014
TIDA: A Spanish EHR Semantic Search Engine
Electronic Health Records (EHR) and the constant adoption of Information Technologies in healthcare have dramatically increased… 
2014
2014
Integrative Lifecourse and Genetic Analysis of Military Working Dogs
Abstract : The purpose of this proposal is to provide insight into gene environment interactions. It leverages the simplified… 
2014
2014
Narrative Event and Temporal Relation Visualization Tool
2013
2013
Integrative Lifecourse and Genetic Analysis of Military Working Dogs
Abstract : The purpose of this proposal is to provide insight into gene environment interactions. It leverages the simplified… 
2013
2013
Using silver and semi-gold standard corpora to compare open named entity recognisers
Ontologies have become a central resource for defining biomedical concepts but linkage to and from textual data is still an… 
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